Robust inference in composite transformation models

The aim of this paper is to base robust inference about a shape parameter indexing a composite transformation model on a quasi- prole likelihood ratio test statistic. First, a general procedure is presented in order to construct a bounded prole estimating function for shape parameters. This method is based on a standard truncation argument from the theory of robustness. Hence, a quasi-likelihood test is derived. Numerical studies and applications to real data show that its use reveals extremely powerful, leading to improved inferences with respect to classical robust Wald and score-type test statistics

Adjusted quasi-profile likelihoods from estimating functions

Higher-order adjustments for a quasi-profile likelihood for a scalar parameter of interest in the presence of nuisance parameters are discussed. Paralleling likelihood asymptotics, these adjustments aim to alleviate some of the problems inherent to the presence of nuisance parameters. Indeed, the estimating equation for the parameter of interest, when the nuisance parameter is substituted with an appropriate estimate, is not unbiased and such a bias can lead to poor inference on the parameter of interest. Following the approach of McCullagh and Tibshirani (1990), here we propose adjustments for the estimating equation for the parameter of interest. Moreover, we discuss two methods for their computation: a bootstrap simulation method, and a first-order asymptotic expression, which can be simplified under an orthogonality assumption. Some examples, in the context of generalized linear models and of robust inference, are provided

towards adaptive residential buildings traditional and contemporary scenarios in bioclimatic design the case of aleppo

Abstract Traditional architectural typologies could play a crucial role in the environmental architectural contemporary framework, due to many attempts developed in last decades to adopt passive house model and bioclimatic criteria in the Mediterranean areas. According to climate responsive approach, the interactive and adaptive relationship between building, site, and climate consider a basic rule to reduce the environmental impact and improving energy efficiency in buildings. In recent decades this concept has extended to the preservation of the cultural identity of the places. High level of adaptive, sustainable and functional performances could be deduced from the traditional residential buildings as the case of Aleppo proves. The traditional Arab house in Aleppo is based on series of adaptive and sustainable-oriented principles derived from the integration of active and interactive design approaches. The old city of Aleppo (included in the UNESCO List of World Heritage Sites) is considered one of the largest historical cities in the world, in terms of its population number (110,000 people before the war). The damage to cultural and historical heritage by the war asserts the peculiarity of the city in the Eastern Mediterranean area. This paper presents the study that the authors are carrying out on Aleppo, considering the bioclimatic approach as a key element to reorient the future construction process of the Syrian city to achieve the objectives of global sustainability and identify design criteria's for the development of the residential buildings. The study also aims to analyse the mutations which appeared through evolution process of residential buildings and identify the invariant elements and the main trajectories of modification established in the past, confirming their compatibility with the future development of Aleppo

Propagation of heavy baryons in heavy-ion collisions

The drag and diffusion coefficients of heavy baryons ($\Lambda_c$ and $\Lambda_b$) in the hadronic phase created in the latter stage of the heavy-ion collisions at RHIC and LHC energies have been evaluated recently. In this work we compute some experimental observables, such as the nuclear suppression factor $R_{AA}$ and the elliptic flow $v_2$ of heavy baryons at RHIC and LHC energies, highlighting the role of the hadronic phase contribution to these observables, which are going to be measured at Run 3 of LHC. For the time evolution of the heavy quarks in the QGP and heavy baryons in the hadronic phase we use the Langevin dynamics. For the hadronization of the heavy quarks to heavy baryons we employ Peterson fragmentation functions. We observe a strong suppression of both the $\Lambda_c$ and $\Lambda_b$. We find that the hadronic medium has a sizable impact on the heavy-baryon elliptic flow whereas the impact of hadronic medium rescattering is almost unnoticeable on the nuclear suppression factor. We evaluate the $\Lambda_c/D$ ratio at RHIC and LHC. We find that $\Lambda_c/D$ ratio remain unaffected due to the hadronic phase rescattering which enable it as a nobel probe of QGP phase dynamics along with its hadronization.Comment: 22 pages, 15 figure

Effect of background color and shelters on female pigmentation in the ornamental red cherry shrimp Neocaridina davidi (Caridea, Atyidae)

Neocaridina davidi, the “red cherry” shrimp, is becoming popular in trade markets because of the reddish coloration of females. The aim of this study was to analyze the impact of background substrate color, and the presence of shelters on N. davidi female pigmentation and astaxanthin content. In the first experiment juveniles were assigned to one of three treatments: white, red, or black background substrate. After 90 days, females exposed to the black background showed higher astaxanthin content and relative carapace colored area than those exposed to white and red backgrounds. The second experiment evaluated the presence of shelters with white or black backgrounds. Juveniles were assigned to one of four treatments: white background with shelters (WS), white background without shelters (WWS), black background with shelters (BS), and black background without shelters (BWS). After 90 days the presence of shelters did not influence either the color nor total astaxanthin content. Females exposed to BWS and BS had higher astaxanthin content and relative carapace colored area than those exposed to WWS and WS. Growing N. davidi with black substrates could be a low cost and easy method to improve its economic value. Furthermore, this species could be cultivated as a pigment-enriched food source for other aquatic species.Fil: Tomas, Ana Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Biodiversidad y Biología Experimental y Aplicada. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Biodiversidad y Biología Experimental y Aplicada; ArgentinaFil: Sganga, Daniela Eliana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Biodiversidad y Biología Experimental y Aplicada. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Biodiversidad y Biología Experimental y Aplicada; ArgentinaFil: López Greco, Laura Susana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Biodiversidad y Biología Experimental y Aplicada. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Biodiversidad y Biología Experimental y Aplicada; Argentin

Hearing loss, tinnitus, hyperacusis, and diplacusis in professional musicians: a systematic review

Professional musicians (PMs) are at high risk of developing hearing loss (HL) and other audiological symptoms such as tinnitus, hyperacusis, and diplacusis. The aim of this systematic review is to (A) assess the risk of developing HL and audiological symptoms in PMs and (B) evaluate if different music genres (Pop/Rock Music-PR; Classical Music-CL) expose PMs to different levels of risk of developing such conditions. Forty-one articles including 4618 PMs were included in the study. HL was found in 38.6% PMs; prevalence was significantly higher among PR (63.5%) than CL (32.8%) PMs; HL mainly affected the high frequencies in the 3000-6000 Hz range and was symmetric in 68% PR PMs and in 44.5% CL PMs. Tinnitus was the most common audiological symptom, followed by hyperacusis and diplacusis. Tinnitus was almost equally distributed between PR and CL PMs; diplacusis was more common in CL than in PR PMs, while prevalence of hyperacusis was higher among PR PMs. Our review showed that PR musicians have a higher risk of developing HL compared to CL PMs; exposure to sounds of high frequency and intensity and absence of ear protection may justify these results. Difference in HL symmetry could be explained by the type of instruments used and consequent single-sided exposure

Protein Ingredients Control in Gluten Free Products Using SDS-PAGE, Developed Competitive Enzyme Immunoassays and Commercial ELISA Kits.

Some protein ingredients declared in the label of gluten free products are allergenic proteins (milk, soy and egg).The proper identification of these proteins in food products is important for consumers who have food allergies. The aim of this study was to control the presence of protein ingredients declared in the label of gluten free products. Samples were analyzed with sodium dodecylsulfate polyacrylamide gel electrophoresis (SDS-PAGE), using an extractive solution of total proteins (Tris-ClH buffer 0.0625 M with 3% sodium dodecylsulfate and 2% 2-mercaptoethanol; pH: 6.8) and a selective solvent for the extraction of caseins (isopropanol 55° + 2-mercaptoethanol / ISO + ME). Developed Competitive enzyme immunoassays were used for the detection / quantification of milk, soy and egg proteins in products elaborated with rice flour. Specific polyclonal rabbit antiserums against milk, soy and egg proteins were used as primary antibodies in these competitive enzyme immunoassays. Commercial ELISA kits from Neogen, R-Biopharm and Romer were used to verify the results. In some samples undeclared allergens were detected. Correct allergens labeling is very important for the safety of allergic consumers. In conclusion, it is possible to identify all the proteins ingredients in these gluten-free foods studied, using a combination of electrophoretic methods and immunochemical methods.Fil: Cellerino, Karina. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Cagnasso, Carolina Elisa. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica; ArgentinaFil: Greco, Carola Beatriz. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica; ArgentinaFil: Docena, Guillermo H.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Estudios Inmunológicos y Fisiopatológicos. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Instituto de Estudios Inmunológicos y Fisiopatológicos; ArgentinaFil: Polenta, Gustavo Alberto. Instituto Nacional de Tecnología Agropecuaria; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Ferreyra, Marcela Verónica. Instituto Nacional de Tecnología Industrial; ArgentinaFil: Lopez, Laura Beatriz. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin

Conformational switch of oncogene promotorial sequences towards non-canonical DNA secondary structures

The folding of DNA molecule into non-canonical secondary structures has been shown to be implicated in many important biological processes which regulate cell proliferation and proteins expression. In particular one of these peculiar secondary structures, called G-quadruplex (G4), has been shown to potentially impair cancer development. G4 occurs along DNA sequences rich of consecutive guanines which can fold through Hoostein pairs by forming stacked planes of guanines tetrads. This conformation prevalently forms along the termini of chromosomes (telomeres) but also along the promoter sites of several oncogenes directly involved in many cancers. The G4 formation leads to an hindrance on DNA molecule which hinder the telomere elongation and transcription process. The result is a switching off of these mechanisms which are directly involved in cancer progression. Several factors can influence the G4 equilibria for example, saline conditions, temperature, pH, the binding with specific proteins as well as the presence of dehydrating cosolutes. Additionally, the overall structural feature of the G4 is strictly dependent upon the DNA sequence. As a results, different G4 can be identified inside the cells. In this project, we focused on the conformational study of the promotorial regions of EGFR and BRAF oncogenes since, on these sites the existence of G4 putative forming regions was found. In particular, the sequences at positions -272, -37 of EGFR and -176 of BRAF from the transcription start site were analyzed. Indeed, no previous literature data were reported about the structural equilibria in solution of these sequences. We found that our tested sequences are actually able to fold into G4 by setting the most proper experimental conditions and also close to the intracellular physiological environment (KCl 150 mM, pH 7.5). However, oncogenes are double stranded sequences and the folding of the complementary cytosine rich strand into i-motif (iM) can be involved in the switching off of gene transcription. Although, so far, no physiological evidence has been observed for i-motif conformation, here, we aimed to investigate also the cytosine rich strand conformation, to assess if this folding in the case of our sequences is compatible with the physiological conditions and if it can synergically works with the G4 to destabilize the double strand. Our data showed that in physiological condition the preferential form is represented by the double strand . However, some selected ligands showed to shift the DNA B-form toward the non canonical conformation. Indeed, here we implemented our work with the screening of two libraries of compounds in order to find a selective and efficient binder. We carried on the binding study of anthraquinones and naphthalene diimides derivatives, known to have the chemical features of efficient G4 binders. These ligands were first tested on different G4 templates, known to be validated models for G4 binding study, and their efficiency on G4 has been compared with the double strand. The most G4 selective derivatives were than investigated towards our oncogenic G4s. Although more work is required to identify a lead compound, we were able to demonstrate how the use of asymmetrical substitution pattern on a aromatic core can implement the selectivity among different G4s. Finally, in order to map the occurrence of G4 conformation in vivo, we set up a novel technique which consists in an in vivo footprinting protocol. This work, performed at University of Mississippi, Oxford, MS (USA), under the supervision of Dr Tracy A. Brooks, should provide novel insight on the G4 formation in the cells according to their physiological and environmental condition